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  5. lcl|VRMN01000003.1_cds_KAA8495412.1_1410

lcl|VRMN01000003.1_cds_KAA8495412.1_1410 (KAA8495412)


Aliases : KAA8495412

Description : 60S ribosomal protein L34


Gene families : OG_01_0004984 (OrthoFinder) Phylogenetic Tree(s): OG0004984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495412.1_1410
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000632.3 tig00000632_g2738.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder
Cre16.g661050 30777324, RPL34 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Dusal.0013s00032.1 33200934 Ribosomal protein L34Ae [Interproscan]. 0.11 OrthoFinder
OT_04G04220.1 No alias Ribosomal protein L34Ae [Interproscan]. 0.07 OrthoFinder
PTI_04G00620.1 No alias Ribosomal protein L34Ae [Interproscan]. 0.14 OrthoFinder
Sro327_g118460.1 Contig839.g9254 60S ribosomal protein L34 0.18 OrthoFinder
SymbC1.scaffold193.9 193.9 Ribosomal protein L34Ae [Interproscan]. 0.03 OrthoFinder
TP04G05710.1 No alias Ribosomal protein L34Ae [Interproscan]. 0.18 OrthoFinder
Vocar.0004s0133.1 32889701 Ribosomal protein L34Ae [Interproscan]. 0.1 OrthoFinder
XM_002504768.1 MICPUN_86588, 86588 Ribosomal protein L34Ae [Interproscan]. 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 95
No external refs found!