1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000003.1_cds_KAA8495411.1_1409

lcl|VRMN01000003.1_cds_KAA8495411.1_1409 (KAA8495411)


Aliases : KAA8495411

Description : Proteasome subunit beta type-5


Gene families : OG_01_0002281 (OrthoFinder) Phylogenetic Tree(s): OG0002281_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495411.1_1409
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.44 tig00020554_g10827.t1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder
Cre10.g461950 30789807 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder
PTI_07G02220.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
Sro1101_g241430.1 Contig3867.g29745 Proteasome subunit pbs-5 0.03 OrthoFinder
TP05G04700.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55415 55415 Proteasome, subunit alpha/beta [Interproscan]. 0.01 OrthoFinder
Vocar.0029s0037.1 32887548 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
XM_002506771.1 MICPUN_96064, 96064 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0038024 cargo receptor activity IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097020 COPII receptor activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 71 251
No external refs found!