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  5. lcl|VRMN01000003.1_cds_KAA8495351.1_1349

lcl|VRMN01000003.1_cds_KAA8495351.1_1349 (KAA8495351)


Aliases : KAA8495351

Description : TRNA (uracil-5-)-methyltransferase-like A


Gene families : OG_01_0001548 (OrthoFinder) Phylogenetic Tree(s): OG0001548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495351.1_1349
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Sro197_g083820.1 Contig3509.g27187 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR010280 U5_MeTrfase_fam 443 629
No external refs found!