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  5. lcl|VRMN01000003.1_cds_KAA8495293.1_1291

lcl|VRMN01000003.1_cds_KAA8495293.1_1291 (KAA8495293)


Aliases : KAA8495293

Description : DNA topoisomerase 6 subunit A


Gene families : OG_01_0000800 (OrthoFinder) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495293.1_1291
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020902.41 tig00020902_g14994.t1 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana 0.01 OrthoFinder
EOD10080 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
OT_05G00520.1 No alias Spo11/DNA topoisomerase VI, subunit A, N-terminal [Interproscan]. 0.01 OrthoFinder
Sro1153_g247050.1 Contig4473.g33620 Meiotic recombination protein SPO11-1 0.02 OrthoFinder
XM_002501950.1 MICPUN_97333, 97333 Type II DNA topoisomerase VI subunit A 1 (SPO11) 0.07 OrthoFinder
XM_002507091.1 MICPUN_77331, 77331 Type II DNA topoisomerase VI subunit A 2 (TOP6A) 0.01 OrthoFinder
XM_003056026.1 MicpuC2_45274, 45274 Spo11/DNA topoisomerase VI, subunit A, N-terminal [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006259 DNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Enrichment
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 123 184
No external refs found!