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  5. lcl|VRMN01000003.1_cds_KAA8495247.1_1245

lcl|VRMN01000003.1_cds_KAA8495247.1_1245 (KAA8495247)


Aliases : KAA8495247

Description : DNA-binding protein SMUBP-2


Gene families : OG_01_0000385 (OrthoFinder) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495247.1_1245
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cre10.g442650 30790906 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder
EOD13888 No alias DNA2/NAM7 helicase-like, AAA domain [Interproscan]. 0.02 OrthoFinder
OT_07G00390.1 No alias DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR001374 R3H_dom 825 877
IPR041679 DNA2/NAM7-like_C 491 711
IPR041677 DNA2/NAM7_AAA_11 229 482
No external refs found!