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  5. lcl|VRMN01000003.1_cds_KAA8495214.1_1212

lcl|VRMN01000003.1_cds_KAA8495214.1_1212 (KAA8495214)


Aliases : KAA8495214

Description : Hypothetical protein


Gene families : OG_01_0005146 (OrthoFinder) Phylogenetic Tree(s): OG0005146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000003.1_cds_KAA8495214.1_1212
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8498721.1_7674 KAA8498721 Copia protein 0.06 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493396.1_9697 KAA8493396 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493397.1_9698 KAA8493397 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493398.1_9699 KAA8493398 Copia protein 0.07 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492705.1_9398 KAA8492705 Hypothetical protein 0.04 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492296.1_5479 KAA8492296 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!