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  5. lcl|VRMN01000002.1_cds_KAA8497368.1_1097

lcl|VRMN01000002.1_cds_KAA8497368.1_1097 (KAA8497368)


Aliases : KAA8497368

Description : Putative rRNA-processing protein EBP2-like


Gene families : OG_01_0003056 (OrthoFinder) Phylogenetic Tree(s): OG0003056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8497368.1_1097
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000880.12 tig00000880_g5169.t1 Probable rRNA-processing protein EBP2 homolog... 0.04 OrthoFinder
Cre07.g351750 30774969 Probable rRNA-processing protein EBP2 homolog... 0.03 OrthoFinder
OT_12G01740.1 No alias Eukaryotic rRNA processing [Interproscan]. 0.04 OrthoFinder
Sro229_g093170.1 Contig429.g5821 Processing protein EBP2 0.01 OrthoFinder
TP09G02570.1 No alias Eukaryotic rRNA processing [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78547 78547 Eukaryotic rRNA processing [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000472.1_cds_GFH12146.1_6623 HaLaN_07781, GFH12146 Eukaryotic rRNA processing [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR008610 Ebp2 52 367
No external refs found!