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  5. lcl|VRMN01000002.1_cds_KAA8497309.1_1038

lcl|VRMN01000002.1_cds_KAA8497309.1_1038 (KAA8497309)


Aliases : KAA8497309

Description : Proteasome subunit alpha type-5-B


Gene families : OG_01_0003569 (OrthoFinder) Phylogenetic Tree(s): OG0003569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8497309.1_1038
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cre17.g724350 30782319, POA5 Protein degradation.26S proteasome.20S core... 0.08 OrthoFinder
Cz06g15090.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
OT_10G01160.1 No alias Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
PTI_11G01930.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.11 OrthoFinder
Sro196_g083440.1 Contig3206.g25340 Proteasome subunit alpha 0.13 OrthoFinder
TP14G02840.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.08 OrthoFinder
XM_002500175.1 MICPUN_107684, 107684 Proteasome, subunit alpha/beta; Proteasome... 0.07 OrthoFinder
XM_003057678.1 MicpuC2_49545, 49545 Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 31 219
IPR000426 Proteasome_asu_N 8 30
No external refs found!