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  5. lcl|VRMN01000002.1_cds_KAA8497279.1_1008

lcl|VRMN01000002.1_cds_KAA8497279.1_1008 (KAA8497279)


Aliases : KAA8497279

Description : RNA polymerase sigma factor RpoD


Gene families : OG_01_0000286 (OrthoFinder) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8497279.1_1008
Cluster HCCA: Cluster_69


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR007624 RNA_pol_sigma70_r3 248 317
IPR007627 RNA_pol_sigma70_r2 168 231
IPR007630 RNA_pol_sigma70_r4 355 405
No external refs found!