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  5. lcl|VRMN01000002.1_cds_KAA8497194.1_923

lcl|VRMN01000002.1_cds_KAA8497194.1_923 (KAA8497194)


Aliases : KAA8497194

Description : Coatomer subunit gamma-2


Gene families : OG_01_0003039 (OrthoFinder) Phylogenetic Tree(s): OG0003039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8497194.1_923
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.20 tig00020629_g12339.t1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder
Cre06.g310750 30779296, COPG1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder
Cz03g11160.t1 No alias Coatomer, gamma subunit, appendage, Ig-like subdomain;... 0.02 OrthoFinder
Dusal.0055s00019.1 33187651 Coatomer, gamma subunit, appendage, Ig-like subdomain;... 0.02 OrthoFinder
Sro26_g017600.1 Contig2432.g19931 Coatomer subunit gamma 0.04 OrthoFinder
Transcript_contig_54351 54351 Clathrin/coatomer adaptor, adaptin-like, N-terminal;... 0.02 OrthoFinder
Vocar.0015s0087.1 32898976 Coatomer subunit gamma, C-terminal; Coatomer, gamma... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 30 543
IPR013040 Coatomer_gsu_app_Ig-like_dom 673 817
IPR014955 DUF1826 1153 1304
IPR032154 Coatomer_g_Cpla 830 878
No external refs found!