lcl|VRMN01000002.1_cds_KAA8497008.1_737 (KAA8497008)


Aliases : KAA8497008

Description : Proteasome subunit beta type-3


Gene families : OG_01_0002457 (OrthoFinder) Phylogenetic Tree(s): OG0002457_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8497008.1_737
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000826.22 tig00000826_g4591.t1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder
Cre06.g267500 30779119 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder
OT_01G05380.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.01 OrthoFinder
PTI_20G00550.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.01 OrthoFinder
Sro1555_g282100.1 Contig2965.g23556 Proteasome subunit beta type-3 0.02 OrthoFinder
Sro2100_g314500.1 Contig2796.g22497 Proteasome subunit beta type-3 0.02 OrthoFinder
TP19G02230.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 189
No external refs found!