lcl|VRMN01000002.1_cds_KAA8497005.1_734 (KAA8497005)

Aliases : KAA8497005

Description : Integrase, catalytic core; gag-polyprotein putative aspartyl protease; Retrotransposon gag domain [Interproscan].

Gene families : OG_01_0002023 (OrthoFinder) Phylogenetic Tree(s): OG0002023_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000002.1_cds_KAA8497005.1_734
Cluster	HCCA: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
lcl\|VRMN01000002.1_cds_KAA8497003.1_732	KAA8497003	Copia protein	0.07	OrthoFinder
lcl\|VRMN01000004.1_cds_KAA8494877.1_3407	KAA8494877	Retrovirus-related Pol polyprotein from transposon TNT 1-94	0.02	OrthoFinder
lcl\|VRMN01000010.1_cds_KAA8492110.1_5293	KAA8492110	Hypothetical protein	0.14	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005162	Retrotrans_gag_dom	50	138
IPR001584	Integrase_cat-core	678	779

External Links

No external refs found!