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  5. lcl|VRMN01000002.1_cds_KAA8496935.1_664

lcl|VRMN01000002.1_cds_KAA8496935.1_664 (KAA8496935)


Aliases : KAA8496935

Description : E3 ubiquitin-protein ligase


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496935.1_664
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000842.16 tig00000842_g4836.t1 No description available 0.01 OrthoFinder
Cre12.g544327 30791687 No description available 0.02 OrthoFinder
Sro222_g091230.1 Contig3134.g24886 RING 0.02 OrthoFinder
SymbC1.scaffold10993.1 10993.1 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003060440.1 MicpuC2_60365, 60365 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon;... 0.02 OrthoFinder
XM_003062145.1 MicpuC2_9885, 9885 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494077.1_3941 KAA8494077 E3 ubiquitin-protein ligase RNF13 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 328 370
No external refs found!