lcl|VRMN01000002.1_cds_KAA8496828.1_557 (KAA8496828)


Aliases : KAA8496828

Description : 60S ribosomal protein L44 Q


Gene families : OG_01_0005313 (OrthoFinder) Phylogenetic Tree(s): OG0005313_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496828.1_557
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000489.11 tig00000489_g1370.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder
Cre06.g310700 30778817, RPL36a Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder
Dusal.0071s00021.1 33185702 Ribosomal protein L44e [Interproscan]. 0.16 OrthoFinder
OT_17G00870.1 No alias Ribosomal protein L44e [Interproscan]. 0.17 OrthoFinder
PTI_05G04360.1 No alias Ribosomal protein L44e [Interproscan]. 0.16 OrthoFinder
Sro232_g093840.1 Contig4063.g31149 60S ribosomal protein L44 0.3 OrthoFinder
TP05G02970.1 No alias Ribosomal protein L44e [Interproscan]. 0.19 OrthoFinder
Vocar.0015s0086.1 32898998 Ribosomal protein L44e [Interproscan]. 0.14 OrthoFinder
XM_002508801.1 MICPUN_62094, 62094 Ribosomal protein L44 0.26 OrthoFinder
XM_003063940.1 MicpuC2_30148, 30148 Ribosomal protein L44e [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57355.1_8982 PRW57355 60S ribosomal L44 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
BP GO:0001932 regulation of protein phosphorylation IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0019900 kinase binding IEP Enrichment
MF GO:0019901 protein kinase binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042325 regulation of phosphorylation IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043549 regulation of kinase activity IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0045859 regulation of protein kinase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051338 regulation of transferase activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Enrichment
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 86 161
No external refs found!