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  5. lcl|VRMN01000002.1_cds_KAA8496796.1_525

lcl|VRMN01000002.1_cds_KAA8496796.1_525 (KAA8496796)


Aliases : KAA8496796

Description : PXMP2/4 family protein 2


Gene families : OG_01_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496796.1_525
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000808.24 tig00000808_g4413.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000912.38 tig00000912_g5444.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020703.32 tig00020703_g13134.t1 Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre11.g467738 30775499 No description available 0.02 OrthoFinder
EOD29872 No alias Mpv17/PMP22 [Interproscan]. 0.01 OrthoFinder
EOD36343 No alias EF-hand domain; Mpv17/PMP22 [Interproscan]. 0.02 OrthoFinder
Sro440_g143350.1 Contig2528.g20647 Peroxisomal membrane protein 2 0.01 OrthoFinder
XM_003059506.1 MicpuC2_40278, 40278 Peroxisomal membrane protein (PMP22) 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000334 3-hydroxyanthranilate 3,4-dioxygenase activity IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009611 response to wounding IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR007248 Mpv17_PMP22 232 290
No external refs found!