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  5. lcl|VRMN01000002.1_cds_KAA8496793.1_522

lcl|VRMN01000002.1_cds_KAA8496793.1_522 (KAA8496793)


Aliases : KAA8496793

Description : Putative GTP-binding protein


Gene families : OG_01_0000895 (OrthoFinder) Phylogenetic Tree(s): OG0000895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496793.1_522
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.31 tig00021319_g20226.t1 Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre01.g058886 30788735 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_07G04410.1 No alias GTP binding protein, second domain; TGS; GTP binding... 0.02 OrthoFinder
PTI_01G05660.1 No alias TGS; GTP binding protein, second domain; GTP binding... 0.02 OrthoFinder
Transcript_contig_58468 58468 GTP binding domain [Interproscan]. 0.01 OrthoFinder
XM_002504172.1 MICPUN_97836, 97836 TGS; GTP binding domain; GTP binding protein, second... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Enrichment
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0006000 fructose metabolic process IEP Enrichment
BP GO:0006378 mRNA polyadenylation IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006481 C-terminal protein methylation IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0018410 C-terminal protein amino acid modification IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0043687 post-translational protein modification IEP Enrichment
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Enrichment
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR031662 GTP-binding_2 186 291
IPR004095 TGS 293 367
IPR006073 GTP-bd 66 166
No external refs found!