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  5. lcl|VRMN01000002.1_cds_KAA8496633.1_362

lcl|VRMN01000002.1_cds_KAA8496633.1_362 (KAA8496633)


Aliases : KAA8496633

Description : Zinc transporter ZTP29


Gene families : OG_01_0000687 (OrthoFinder) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496633.1_362
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Sro666_g184020.1 Contig1358.g12521 Zinc transporter ZupT 0.02 OrthoFinder
Transcript_contig_89151 89151 Zinc/iron permease [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003689 ZIP 138 279
No external refs found!