1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000002.1_cds_KAA8496609.1_338

lcl|VRMN01000002.1_cds_KAA8496609.1_338 (KAA8496609)


Aliases : KAA8496609

Description : Chlorophyll a-b binding protein, chloroplastic


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496609.1_338
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
EOD07752 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
EOD08157 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD18950 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD24660 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD26056 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
EOD33861 No alias Light harvesting protein [Ensembl]. 0.03 OrthoFinder
PTI_02G04020.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_04G04620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_15G00600.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_15G00620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Sro101_g051590.1 Contig348.g4712 Fucoxanthin-chlorophyll a-c binding protein 0.06 OrthoFinder
Sro1151_g246800.1 Contig4710.g35031 Chloroplastic 0.06 OrthoFinder
Sro234_g094380.1 Contig3223.g25485 Fucoxanthin-chlorophyll a-c binding protein 0.06 OrthoFinder
Sro263_g102180.1 Contig612.g7540 Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic 0.06 OrthoFinder
Sro453_g146050.1 Contig1693.g15162 B binding protein CP29 0.06 OrthoFinder
Sro656_g182410.1 Contig256.g3152 Chloroplastic 0.02 OrthoFinder
TP05G03540.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP09G03710.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP18G01450.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0020s0067.1 32886585 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001602.1_cds_GFH20248.1_14725 HaLaN_17338, GFH20248 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019684 photosynthesis, light reaction IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 43 191
No external refs found!