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  5. lcl|VRMN01000002.1_cds_KAA8496511.1_240

lcl|VRMN01000002.1_cds_KAA8496511.1_240 (KAA8496511)


Aliases : KAA8496511

Description : Putative RNA helicase SDE3


Gene families : OG_01_0001226 (OrthoFinder) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496511.1_240
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Dusal.0535s00001.1 33187729 DNA2/NAM7 helicase-like, AAA domain; AAA domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 1110 1173
IPR041677 DNA2/NAM7_AAA_11 1198 1285
IPR041679 DNA2/NAM7-like_C 1293 1503
No external refs found!