1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000002.1_cds_KAA8496440.1_169

lcl|VRMN01000002.1_cds_KAA8496440.1_169 (KAA8496440)


Aliases : KAA8496440

Description : Hypothetical protein


Gene families : OG_01_0002899 (OrthoFinder) Phylogenetic Tree(s): OG0002899_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496440.1_169
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8498185.1_7138 KAA8498185 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.08 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496441.1_170 KAA8496441 Hypothetical protein 0.14 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494667.1_3197 KAA8494667 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.06 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493145.1_9446 KAA8493145 Hypothetical protein 0.06 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493295.1_9596 KAA8493295 Hypothetical protein 0.12 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!