lcl|VRMN01000002.1_cds_KAA8496432.1_161 (KAA8496432)

Aliases : KAA8496432

Description : Ultraviolet-B receptor UVR8

Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000002.1_cds_KAA8496432.1_161
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021318.63	tig00021318_g20183.t1	Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cre05.g230600	30783444	External stimuli response.light.UV-B light.UVR8 photoreceptor	0.02	OrthoFinder
EOD26777	No alias	Regulator of chromosome condensation (RCC1) repeat;...	0.03	OrthoFinder
EOD27249	No alias	E3 ubiquitin ligase [Ensembl].	0.01	OrthoFinder
Sro670_g184710.1	Contig318.g4223	RCC1 and BTB domain-containing protein 2	0.01	OrthoFinder
SymbC1.scaffold519.3	519.3	Regulator of chromosome condensation (RCC1) repeat;...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Enrichment
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Enrichment
BP	GO:0015696	ammonium transport	IEP	Enrichment
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Enrichment
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000408	Reg_chr_condens	178	237
IPR000408	Reg_chr_condens	125	175

External Links

No external refs found!