lcl|VRMN01000002.1_cds_KAA8496406.1_135 (KAA8496406)

Aliases : KAA8496406

Description : Cold shock domain-containing protein 4

Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000002.1_cds_KAA8496406.1_135
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g249800	30780167	Lipid metabolism.sphingolipid...	0.02	OrthoFinder
OT_08G00880.1	No alias	Cold-shock protein, DNA-binding [Interproscan].	0.02	OrthoFinder
Sro1493_g277300.1	Contig1998.g17099	Y-box-binding protein 2	0.01	OrthoFinder
Sro42_g025490.1	Contig312.g4126	Probable cold shock protein A	0.02	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60377.1_4245	PRW60377	Phosphatidylinositol:ceramide inositolphosphotransferase 1	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	Enrichment
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	10	75

External Links

No external refs found!