lcl|VRMN01000002.1_cds_KAA8496385.1_114 (KAA8496385)


Aliases : KAA8496385

Description : Putative 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic


Gene families : OG_01_0002832 (OrthoFinder) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000002.1_cds_KAA8496385.1_114
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000203.22 tig00000203_g17127.t1 Amino acid metabolism.biosynthesis.aspartate... 0.01 OrthoFinder
Cre14.g627850 30776180 Amino acid metabolism.biosynthesis.aspartate... 0.03 OrthoFinder
Cz07g21240.t1 No alias Dihydrodipicolinate reductase, N-terminal;... 0.03 OrthoFinder
Dusal.0105s00025.1 33200197 Dihydrodipicolinate reductase, N-terminal;... 0.01 OrthoFinder
PTI_02G05880.1 No alias Dihydrodipicolinate reductase, N-terminal;... 0.04 OrthoFinder
Sro394_g133940.1 Contig4153.g31724 Tetrahydrodipicolinate reductase 2, chloroplastic 0.04 OrthoFinder
Transcript_contig_78371 78371 Dihydrodipicolinate reductase, C-terminal;... 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39218.1_2708 PRW39218 4-hydroxy-tetrahydrodipicolinate reductase chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEA Interproscan
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000846 DapB_N 73 197
IPR022663 DapB_C 201 343
No external refs found!