lcl|VRMN01000002.1_cds_KAA8496314.1_43 (KAA8496314)

Aliases : KAA8496314

Description : Transposable element Tc3 transposase

Gene families : OG_01_0003235 (OrthoFinder) Phylogenetic Tree(s): OG0003235_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000002.1_cds_KAA8496314.1_43
Cluster	HCCA: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
lcl\|VRMN01000001.1_cds_KAA8499722.1_8675	KAA8499722	Transposable element Tc3 transposase	0.11	OrthoFinder
lcl\|VRMN01000008.1_cds_KAA8493093.1_2829	KAA8493093	Transposable element Tc3 transposase	0.11	OrthoFinder
lcl\|VRMN01000012.1_cds_KAA8491638.1_5106	KAA8491638	Transposable element Tc3 transposase	0.14	OrthoFinder
lcl\|VRMN01000012.1_cds_KAA8491651.1_5119	KAA8491651	Transposable element Tc3 transposase	0.12	OrthoFinder
lcl\|VRMN01000017.1_cds_KAA8490931.1_6134	KAA8490931	Transposable element Tc3 transposase	0.11	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006310	DNA recombination	None	Extended
BP	GO:0006313	transposition, DNA-mediated	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0032196	transposition	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR038717	Tc1-like_DDE_dom	150	269
IPR002492	Transposase_Tc1-like	42	106

External Links

No external refs found!