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  5. lcl|VRMN01000001.1_cds_KAA8500030.1_8983

lcl|VRMN01000001.1_cds_KAA8500030.1_8983 (KAA8500030)


Aliases : KAA8500030

Description : Retrotransposon gag domain [Interproscan].


Gene families : OG_01_0009259 (OrthoFinder) Phylogenetic Tree(s): OG0009259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8500030.1_8983

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497512.1_6465 KAA8497512 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493428.1_9729 KAA8493428 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 172 261
No external refs found!