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  5. lcl|VRMN01000001.1_cds_KAA8499821.1_8774

lcl|VRMN01000001.1_cds_KAA8499821.1_8774 (KAA8499821)


Aliases : KAA8499821

Description : Serine--tRNA ligase, chloroplastic/mitochondrial


Gene families : OG_01_0001545 (OrthoFinder) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499821.1_8774
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cre02.g082877 30784992 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
OT_04G01600.1 No alias Serine-tRNA synthetase, type1, N-terminal;... 0.02 OrthoFinder
Sro530_g161270.1 Contig4609.g34412 Serine--tRNA ligase 0.02 OrthoFinder
TP02G06630.1 No alias Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [Interproscan]. 0.02 OrthoFinder
XM_003057591.1 MicpuC2_70902, 70902 Seryl-tRNA synthetase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR015866 Ser-tRNA-synth_1_N 88 193
IPR002314 aa-tRNA-synt_IIb 307 483
No external refs found!