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  5. lcl|VRMN01000001.1_cds_KAA8499818.1_8771

lcl|VRMN01000001.1_cds_KAA8499818.1_8771 (KAA8499818)


Aliases : KAA8499818

Description : Putative thioredoxin-2


Gene families : OG_01_0000156 (OrthoFinder) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499818.1_8771
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Sro536_g162100.1 Contig299.g3940 Thioredoxin M-type, chloroplastic 0.03 OrthoFinder
Vocar.0001s0395.1 32884921 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
XM_003060336.1 MicpuC2_34621, 34621 Hypothetical protein (TRX_4) 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003713 transcription coactivator activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 41 141
No external refs found!