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  5. lcl|VRMN01000001.1_cds_KAA8499807.1_8760

lcl|VRMN01000001.1_cds_KAA8499807.1_8760 (KAA8499807)


Aliases : KAA8499807

Description : SET domain [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499807.1_8760
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cz03g37010.t1 No alias SET domain [Interproscan]. 0.03 OrthoFinder
Cz04g25210.t1 No alias Hypothetical protein 0.02 OrthoFinder
Dusal.0332s00002.1 33188712 SET domain [Interproscan]. 0.01 OrthoFinder
PTI_00G02910.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
PTI_17G02830.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold11328.1 11328.1 SET domain [Interproscan]. 0.01 OrthoFinder
TP05G03200.1 No alias SET domain [Interproscan]. 0.02 OrthoFinder
XM_002506785.1 MICPUN_89128, 89128 Set domain protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 100 305
No external refs found!