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  5. lcl|VRMN01000001.1_cds_KAA8499688.1_8641

lcl|VRMN01000001.1_cds_KAA8499688.1_8641 (KAA8499688)


Aliases : KAA8499688

Description : ATPase family AAA domain-containing protein 1-A


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499688.1_8641
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.31 tig00000655_g2857.t1 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre10.g427600 30790542, KAT1 Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase... 0.02 OrthoFinder
PTI_31G00050.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
Transcript_contig_56032 56032 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.01 OrthoFinder
Transcript_contig_59114 59114 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
XM_002500459.1 MICPUN_80010, 80010 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.01 OrthoFinder
XM_003059130.1 MicpuC2_18003, 18003 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006476 protein deacetylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016575 histone deacetylation IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0035601 protein deacylation IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0098732 macromolecule deacylation IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 423 456
IPR003959 ATPase_AAA_core 166 293
IPR003959 ATPase_AAA_core 326 400
No external refs found!