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  5. lcl|VRMN01000001.1_cds_KAA8499557.1_8510

lcl|VRMN01000001.1_cds_KAA8499557.1_8510 (KAA8499557)


Aliases : KAA8499557

Description : Protein LHY


Gene families : OG_01_0000201 (OrthoFinder) Phylogenetic Tree(s): OG0000201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499557.1_8510
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.44 tig00000217_g19175.t1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder
Cre06.g275350 30778881 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder
OT_03G03020.1 No alias SANT/Myb domain [Interproscan]. 0.02 OrthoFinder
Vocar.0011s0281.1 32895123 SANT/Myb domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494521.1_3051 KAA8494521 Myb-like protein I 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001005 SANT/Myb 120 162
No external refs found!