Aliases : KAA8499550
Description : Retrovirus-related Pol polyprotein from transposon
Gene families : OG_01_0000071 (OrthoFinder) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000001.1_cds_KAA8499550.1_8503 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cz07g09140.t1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
lcl|BLLF01000958.1_cds_GFH16187.1_10664 | HaLaN_12562, GFH16187 | Hypothetical protein | 0.01 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8497479.1_6432 | KAA8497479 | Transposon Ty3-G Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498183.1_7136 | KAA8498183 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498184.1_7137 | KAA8498184 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498457.1_7410 | KAA8498457 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498876.1_7829 | KAA8498876 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498877.1_7830 | KAA8498877 | Transposon Ty3-G Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499405.1_8358 | KAA8499405 | Retrotransposon-derived protein PEG10 | 0.04 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497383.1_1112 | KAA8497383 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495213.1_1211 | KAA8495213 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495319.1_1317 | KAA8495319 | Transposon Ty3-I Gag-Pol polyprotein | 0.1 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495846.1_1844 | KAA8495846 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494765.1_3295 | KAA8494765 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493854.1_4616 | KAA8493854 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8492723.1_2459 | KAA8492723 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8493085.1_2821 | KAA8493085 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000011.1_cds_KAA8491827.1_4835 | KAA8491827 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000014.1_cds_KAA8491407.1_2408 | KAA8491407 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000017.1_cds_KAA8491004.1_6207 | KAA8491004 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000021.1_cds_KAA8490612.1_5711 | KAA8490612 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000023.1_cds_KAA8490532.1_5898 | KAA8490532 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000026.1_cds_KAA8490460.1_6406 | KAA8490460 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000030.1_cds_KAA8490385.1_3742 | KAA8490385 | Transposon Ty3-G Gag-Pol polyprotein | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0015074 | DNA integration | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
No external refs found! |