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  5. lcl|VRMN01000001.1_cds_KAA8499521.1_8474

lcl|VRMN01000001.1_cds_KAA8499521.1_8474 (KAA8499521)


Aliases : KAA8499521

Description : Granule-bound starch synthase 1, chloroplastic/amyloplastic


Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499521.1_8474
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cre17.g721500 30782074 Carbohydrate metabolism.starch... 0.02 OrthoFinder
Cz12g15250.t1 No alias Starch synthase, catalytic domain; Glycosyl transferase,... 0.03 OrthoFinder
UNPLg00638.t1 No alias Starch synthase, catalytic domain; Glycosyl transferase,... 0.03 OrthoFinder
Vocar.0001s1467.1 32885239 Glycosyl transferase, family 1; Starch synthase,... 0.03 OrthoFinder
Vocar.0015s0224.1 32898942 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
XM_003061059.1 MicpuC2_44605, 44605 Glycosyltransferase family 5 protein (SSIIB) 0.02 OrthoFinder
lcl|BLLF01000949.1_cds_GFH16119.1_10596 HaLaN_12479, GFH16119 Starch synthase, chloroplastic/amyloplastic 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59930.1_6319 PRW59930 Granule-bound starch synthase chloroplastic amyloplastic-like 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006751 glutathione catabolic process IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:0043171 peptide catabolic process IEP Enrichment
BP GO:0044273 sulfur compound catabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 21 281
IPR001296 Glyco_trans_1 333 474
No external refs found!