1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000001.1_cds_KAA8499481.1_8434

lcl|VRMN01000001.1_cds_KAA8499481.1_8434 (KAA8499481)


Aliases : KAA8499481

Description : 60S ribosomal protein L37a


Gene families : OG_01_0004072 (OrthoFinder) Phylogenetic Tree(s): OG0004072_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499481.1_8434
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.64 tig00000718_g3736.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder
Cre06.g257150 30778478, RPL37a Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 OrthoFinder
Dusal.0090s00007.1 33189967 Ribosomal protein L37ae [Interproscan]. 0.09 OrthoFinder
EOD36046 No alias Ribosomal protein L37ae [Interproscan]. 0.1 OrthoFinder
OT_15G00060.1 No alias Ribosomal protein L37ae [Interproscan]. 0.2 OrthoFinder
PTI_15G00450.1 No alias Ribosomal protein L37ae [Interproscan]. 0.24 OrthoFinder
Sro27_g018140.1 Contig3926.g30075 60S ribosomal protein L37a (Fragment) 0.32 OrthoFinder
TP12G00350.1 No alias Ribosomal protein L37ae [Interproscan]. 0.25 OrthoFinder
Vocar.0002s0662.1 32890689 Ribosomal protein L37ae [Interproscan]. 0.07 OrthoFinder
XM_002506634.1 MICPUN_92616, 92616 Ribosomal protein L37ae (RPL37AE) 0.22 OrthoFinder
XM_003061255.1 MicpuC2_28424, 28424 Ribosomal protein L37ae 0.12 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56338.1_10034 PRW56338 60S ribosomal L37a 0.25 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR002674 Ribosomal_L37ae 4 87
No external refs found!