1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000001.1_cds_KAA8499385.1_8338

lcl|VRMN01000001.1_cds_KAA8499385.1_8338 (KAA8499385)


Aliases : KAA8499385

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94


Gene families : OG_01_0001103 (OrthoFinder) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499385.1_8338

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8498413.1_7366 KAA8498413 Transposon Ty1-OR Gag-Pol polyprotein 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494243.1_4107 KAA8494243 Hypothetical protein 0.11 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493479.1_4241 KAA8493479 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493483.1_4245 KAA8493483 Transposon Ty1-BL Gag-Pol polyprotein 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493209.1_9510 KAA8493209 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.11 OrthoFinder
lcl|VRMN01000021.1_cds_KAA8490613.1_5712 KAA8490613 Hypothetical protein 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 959 1172
No external refs found!