Aliases : KAA8499358
Description : Pre-mRNA cleavage factor Im 25 kDa subunit 2
Gene families : OG_01_0006391 (OrthoFinder) Phylogenetic Tree(s): OG0006391_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000001.1_cds_KAA8499358.1_8311 | |
Cluster | HCCA: Cluster_93 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g462700 | 30790341 | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.02 | OrthoFinder | |
XM_003058949.1 | MicpuC2_33672, 33672 | Cleavage/polyadenylation specificity factor subunit 5... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003729 | mRNA binding | IEA | Interproscan |
CC | GO:0005849 | mRNA cleavage factor complex | IEA | Interproscan |
BP | GO:0006378 | mRNA polyadenylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003856 | 3-dehydroquinate synthase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Enrichment |
MF | GO:0004555 | alpha,alpha-trehalase activity | IEP | Enrichment |
BP | GO:0005984 | disaccharide metabolic process | IEP | Enrichment |
BP | GO:0005991 | trehalose metabolic process | IEP | Enrichment |
BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Enrichment |
BP | GO:0006284 | base-excision repair | IEP | Enrichment |
BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
BP | GO:0007034 | vacuolar transport | IEP | Enrichment |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
MF | GO:0015927 | trehalase activity | IEP | Enrichment |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Enrichment |
MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
BP | GO:0052646 | alditol phosphate metabolic process | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016706 | Cleav_polyA_spec_factor_su5 | 124 | 335 |
No external refs found! |