1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000001.1_cds_KAA8499330.1_8283

lcl|VRMN01000001.1_cds_KAA8499330.1_8283 (KAA8499330)


Aliases : KAA8499330

Description : Putative mitochondrial intermediate peptidase, mitochondrial


Gene families : OG_01_0000375 (OrthoFinder) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499330.1_8283
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre02.g073400 30785432 Mitochondrial intermediate peptidase, mitochondrial... 0.01 OrthoFinder
Cz19g01050.t1 No alias Peptidase M3A/M3B catalytic domain [Interproscan]. 0.02 OrthoFinder
PTI_29G00660.1 No alias Peptidase M3A/M3B catalytic domain [Interproscan]. 0.03 OrthoFinder
XM_002509091.1 MICPUN_98128, 98128 Peptidase M3A/M3B catalytic domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001567 Pept_M3A_M3B_dom 447 801
IPR001567 Pept_M3A_M3B_dom 291 409
No external refs found!