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  5. lcl|VRMN01000001.1_cds_KAA8499207.1_8160

lcl|VRMN01000001.1_cds_KAA8499207.1_8160 (KAA8499207)


Aliases : KAA8499207

Description : Protein YqeH


Gene families : OG_01_0000812 (OrthoFinder) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499207.1_8160
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022080.6 tig00022080_g23790.t1 NO-associated protein 1, chloroplastic/mitochondrial... 0.02 OrthoFinder
Cre07.g315400 30774434 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.02 OrthoFinder
Cre09.g400550 30781173, NOA1 NO-associated protein 1, chloroplastic/mitochondrial... 0.04 OrthoFinder
EOD41710 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
OT_06G03500.1 No alias GTP binding domain [Interproscan]. 0.07 OrthoFinder
PTI_22G01830.1 No alias GTP binding domain [Interproscan]. 0.01 OrthoFinder
Sro453_g146070.1 Contig1693.g15164 Nitric oxide 0.02 OrthoFinder
TP03G05240.1 No alias Hypothetical protein 0.02 OrthoFinder
XM_002501467.1 MICPUN_58144, 58144 GTPase 0.04 OrthoFinder
XM_003062118.1 MicpuC2_28932, 28932 GTP binding domain [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32832.1_3690 PRW32832 IMP dehydrogenase GMP reductase 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0015939 pantothenate metabolic process IEP Enrichment
BP GO:0015940 pantothenate biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 196 272
No external refs found!