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  5. lcl|VRMN01000001.1_cds_KAA8499029.1_7982

lcl|VRMN01000001.1_cds_KAA8499029.1_7982 (KAA8499029)


Aliases : KAA8499029

Description : Vacuolar-sorting protein SNF8


Gene families : OG_01_0003888 (OrthoFinder) Phylogenetic Tree(s): OG0003888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8499029.1_7982
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Cre17.g706650 30782822, VPS22 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
BP GO:0017006 protein-tetrapyrrole linkage IEP Enrichment
BP GO:0017007 protein-bilin linkage IEP Enrichment
BP GO:0017009 protein-phycocyanobilin linkage IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR040608 Snf8/Vps36 5 224
No external refs found!