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  5. lcl|VRMN01000001.1_cds_KAA8498978.1_7931

lcl|VRMN01000001.1_cds_KAA8498978.1_7931 (KAA8498978)


Aliases : KAA8498978

Description : Hypothetical protein


Gene families : OG_01_0005898 (OrthoFinder) Phylogenetic Tree(s): OG0005898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498978.1_7931
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_251 251 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment

No InterPro domains available for this sequence

No external refs found!