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  5. lcl|VRMN01000001.1_cds_KAA8498561.1_7514

lcl|VRMN01000001.1_cds_KAA8498561.1_7514 (KAA8498561)


Aliases : KAA8498561

Description : ATP-dependent Clp protease proteolytic subunit 2


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498561.1_7514
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.201 tig00020553_g10691.t1 ATP-dependent Clp protease proteolytic subunit 4,... 0.04 OrthoFinder
Cpa|evm.model.tig00020563.155 tig00020563_g11357.t1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cpa|evm.model.tig00020952.49 tig00020952_g16507.t1 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder
Cpa|evm.model.tig00021522.2 tig00021522_g22096.t1 ATP-dependent Clp protease proteolytic subunit 5,... 0.02 OrthoFinder
EOD14390 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
EOD16395 No alias Putative endopeptidase Clp [Ensembl]. 0.01 OrthoFinder
EOD35346 No alias Putative endopeptidase Clp [Ensembl]. 0.03 OrthoFinder
Sro178_g078080.1 Contig275.g3533 Protease proteolytic subunit 0.01 OrthoFinder
Sro20_g014090.1 Contig2954.g23439 Protease proteolytic subunit 0.01 OrthoFinder
TP24G00340.1 No alias Clp protease proteolytic subunit... 0.01 OrthoFinder
Transcript_contig_56908 56908 Clp protease proteolytic subunit... 0.01 OrthoFinder
XM_003056341.1 MicpuC2_55345, 55345 ATP-dependent clp protease (CLP) 0.02 OrthoFinder
lcl|BLLF01003830.1_cds_GFH28324.1_22801 HaLaN_26798, GFH28324 ATP-dependent Clp protease proteolytic subunit 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0017006 protein-tetrapyrrole linkage IEP Enrichment
BP GO:0017007 protein-bilin linkage IEP Enrichment
BP GO:0017009 protein-phycocyanobilin linkage IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 61 237
No external refs found!