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  5. lcl|VRMN01000001.1_cds_KAA8498508.1_7461

lcl|VRMN01000001.1_cds_KAA8498508.1_7461 (KAA8498508)


Aliases : KAA8498508

Description : Splicing factor 3B subunit 1


Gene families : OG_01_0003468 (OrthoFinder) Phylogenetic Tree(s): OG0003468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8498508.1_7461
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Cre12.g494100 30793549 RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder
EOD41730 No alias Splicing factor 3B subunit 1 [Interproscan]. 0.02 OrthoFinder
OT_03G00270.1 No alias Splicing factor 3B subunit 1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000335.1_cds_GFH10663.1_5140 HaLaN_06016, GFH10663 TOG domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR015016 SF3b_su1 289 418
No external refs found!