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Aliases : KAA8498413
Description : Transposon Ty1-OR Gag-Pol polyprotein
Gene families : OG_01_0001103 (OrthoFinder) Phylogenetic Tree(s): OG0001103_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000001.1_cds_KAA8498413.1_7366 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|VRMN01000001.1_cds_KAA8499385.1_8338 | KAA8499385 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 0.01 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494733.1_3263 | KAA8494733 | Retrovirus-related Pol polyprotein from transposon | 0.02 | OrthoFinder | |
| lcl|VRMN01000006.1_cds_KAA8493479.1_4241 | KAA8493479 | Hypothetical protein | 0.06 | OrthoFinder | |
| lcl|VRMN01000006.1_cds_KAA8493483.1_4245 | KAA8493483 | Transposon Ty1-BL Gag-Pol polyprotein | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| BP | GO:0006468 | protein phosphorylation | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Enrichment |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008705 | methionine synthase activity | IEP | Enrichment |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| BP | GO:0016310 | phosphorylation | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| BP | GO:0022402 | cell cycle process | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| CC | GO:0031390 | Ctf18 RFC-like complex | IEP | Enrichment |
| MF | GO:0031419 | cobalamin binding | IEP | Enrichment |
| MF | GO:0042084 | 5-methyltetrahydrofolate-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 1046 | 1264 |
| No external refs found! |