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  5. lcl|VRMN01000001.1_cds_KAA8497980.1_6933

lcl|VRMN01000001.1_cds_KAA8497980.1_6933 (KAA8497980)


Aliases : KAA8497980

Description : DNA repair protein RAD51-like 1


Gene families : OG_01_0000338 (OrthoFinder) Phylogenetic Tree(s): OG0000338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497980.1_6933
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278151 30779436 DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana 0.01 OrthoFinder
EOD12221 No alias Rad51 DNA recombinase [Ensembl]. 0.03 OrthoFinder
EOD18508 No alias Rad51 DNA recombinase [Ensembl]. 0.01 OrthoFinder
OT_11G01780.1 No alias DNA recombination and repair protein Rad51-like,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 93 346
No external refs found!