lcl|VRMN01000001.1_cds_KAA8497936.1_6889 (KAA8497936)


Aliases : KAA8497936

Description : Calmodulin


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497936.1_6889
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000692.65 tig00000692_g3264.t1 Calmodulin-2 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Cpa|evm.model.tig00001388.4 tig00001388_g8574.t1 Caltractin OS=Scherffelia dubia 0.02 OrthoFinder
Cpa|evm.model.tig00021720.13 tig00021720_g23183.t1 RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder
Dusal.0665s00004.1 33203208 EF-hand domain pair [Interproscan]. 0.02 OrthoFinder
EOD16975 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD27565 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
Sro321_g116830.1 Contig56.g439 Putative calmodulin-like protein 0.02 OrthoFinder
SymbC1.scaffold1032.3 1032.3 EF-hand domain; EF-hand domain pair [Interproscan]. 0.01 OrthoFinder
TP07G01950.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
TP07G01960.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0019s0206.1 32892735 EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0050s0015.1 32892391 EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_002503574.1 MICPUN_60109, 60109 EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_003058919.1 MicpuC2_27001, 27001 EF-hand domain [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494184.1_4048 KAA8494184 Caltractin 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
BP GO:0000105 histidine biosynthetic process IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0038024 cargo receptor activity IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0097020 COPII receptor activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 74
IPR002048 EF_hand_dom 85 147
No external refs found!