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  5. lcl|VRMN01000001.1_cds_KAA8497825.1_6778

lcl|VRMN01000001.1_cds_KAA8497825.1_6778 (KAA8497825)


Aliases : KAA8497825

Description : Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic


Gene families : OG_01_0002042 (OrthoFinder) Phylogenetic Tree(s): OG0002042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497825.1_6778
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000471.12 tig00000471_g1187.t1 Coenzyme metabolism.tetrapyrrol... 0.05 OrthoFinder
Dusal.0025s00007.1 33200676 Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.03 OrthoFinder
EOD09628 No alias Coproporphyrinogen oxidase [Ensembl]. 0.04 OrthoFinder
OT_03G03200.1 No alias Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.05 OrthoFinder
PTI_17G02750.1 No alias Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.04 OrthoFinder
Sro443_g144070.1 Contig715.g8253 Oxygen-dependent coproporphyrinogen-III oxidase 0.04 OrthoFinder
TP01G11520.1 No alias Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54910 54910 Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.03 OrthoFinder
Vocar.0028s0183.1 32895648 Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.03 OrthoFinder
XM_002501187.1 MICPUN_104790, 104790 Coproporphyrinogen III oxidase chloroplast precursor (HEMF) 0.05 OrthoFinder
XM_003062268.1 MicpuC2_52031, 52031 Coproporphyrinogen III oxidase chloroplast precursor (HEMF) 0.06 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59269.1_6938 PRW59269 Coproporphyrinogen III oxidase chloroplast precursor 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34019.1_3059 PRW34019 Coproporphyrinogen III oxidase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
CC GO:0030089 phycobilisome IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001260 Coprogen_oxidase_aer 108 407
No external refs found!