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  5. lcl|VRMN01000001.1_cds_KAA8497811.1_6764

lcl|VRMN01000001.1_cds_KAA8497811.1_6764 (KAA8497811)


Aliases : KAA8497811

Description : COBW domain-containing protein 1


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497811.1_6764
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
TP02G08190.1 No alias CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder
Transcript_contig_3849 3849 CobW/HypB/UreG, nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_56965 56965 CobW/HypB/UreG, nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder
XM_003056363.1 MicpuC2_24889, 24889 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.02 OrthoFinder
lcl|BLLF01003418.1_cds_GFH27281.1_21758 HaLaN_25577, GFH27281 COBW domain-containing protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 288 378
IPR003495 CobW/HypB/UreG_dom 11 192
No external refs found!