lcl|VRMN01000001.1_cds_KAA8497788.1_6741 (KAA8497788)

Aliases : KAA8497788

Description : Small glutamine-rich tetratricopeptide repeat-containing protein 2

Gene families : OG_01_0000105 (OrthoFinder) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497788.1_6741
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cz01g36070.t1 No alias STI1 domain; Tetratricopeptide repeat; Tetratricopeptide... 0.02 OrthoFinder
Cz04g10220.t1 No alias Tetratricopeptide repeat 2; Tetratricopeptide repeat... 0.03 OrthoFinder
SymbC1.scaffold23268.1 23268.1 Tetratricopeptide repeat 2 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR019734 TPR_repeat 258 290
No external refs found!