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  5. lcl|VRMN01000001.1_cds_KAA8497612.1_6565

lcl|VRMN01000001.1_cds_KAA8497612.1_6565 (KAA8497612)


Aliases : KAA8497612

Description : Phosphoglucan phosphatase LSF2, chloroplastic


Gene families : OG_01_0000634 (OrthoFinder) Phylogenetic Tree(s): OG0000634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497612.1_6565
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cz04g19150.t1 No alias AMP-activated protein kinase, glycogen-binding domain;... 0.03 OrthoFinder
Dusal.0300s00016.1 33188065 Dual specificity phosphatase, catalytic domain [Interproscan]. 0.02 OrthoFinder
XM_002506804.1 MICPUN_106613, 106613 Dual specificity phosphatase, catalytic domain [Interproscan]. 0.02 OrthoFinder
XM_003058794.1 MicpuC2_58019, 58019 Hypothetical protein 0.02 OrthoFinder
XM_003058795.1 MicpuC2_58020, 58020 Dual specificity phosphatase, catalytic domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA Interproscan
BP GO:0016311 dephosphorylation IEA Interproscan
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004506 squalene monooxygenase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006751 glutathione catabolic process IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:0043171 peptide catabolic process IEP Enrichment
BP GO:0044273 sulfur compound catabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000340 Dual-sp_phosphatase_cat-dom 371 497
IPR002044 CBM_fam20 118 205
IPR002044 CBM_fam20 14 75
No external refs found!