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  5. lcl|VRMN01000001.1_cds_KAA8497605.1_6558

lcl|VRMN01000001.1_cds_KAA8497605.1_6558 (KAA8497605)


Aliases : KAA8497605

Description : Ferredoxin, leaf L-A


Gene families : OG_01_0000864 (OrthoFinder) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000001.1_cds_KAA8497605.1_6558
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.35 tig00000194_g14763.t1 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre07.g334800 30775099, FDX4 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre17.g700950 30781793, FDX5 Photosynthesis.photophosphorylation.linear electron... 0.01 OrthoFinder
Cz07g28150.t1 No alias 2Fe-2S ferredoxin-type iron-sulfur binding domain [Interproscan]. 0.04 OrthoFinder
Vocar.0013s0256.1 32896323 2Fe-2S ferredoxin-type iron-sulfur binding domain [Interproscan]. 0.02 OrthoFinder
XM_002504446.1 MICPUN_61126, 61126 Ferredoxin, chloroplast precursor 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 58 132
No external refs found!