lcl|VRMN01000001.1_cds_KAA8497588.1_6541 (KAA8497588)

Aliases : KAA8497588

Description : Chaperone protein ClpB1

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000001.1_cds_KAA8497588.1_6541
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g090850	30785159, CLPB3	External stimuli response.temperature.Hsp...	0.02	OrthoFinder
Dusal.0219s00011.1	33193390	ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain; Clp...	0.02	OrthoFinder
OT_05G04800.1	No alias	Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;...	0.02	OrthoFinder
Sro727_g193640.1	Contig1496.g13669	Protein ClpB	0.03	OrthoFinder
Sro910_g219110.1	Contig1356.g12503	Protein ClpB	0.02	OrthoFinder
TP03G02210.1	No alias	ATPase, AAA-type, core; Clp ATPase, C-terminal;...	0.02	OrthoFinder
Vocar.0067s0002.1	32884134	ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,...	0.02	OrthoFinder
XM_003056827.1	MicpuC2_56397, 56397	Chaperone, Hsp100 family, clpb-type	0.02	OrthoFinder
XM_003060040.1	MicpuC2_59476, 59476	ATP-dependent clp protease	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000814	ESCRT II complex	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
CC	GO:0036452	ESCRT complex	IEP	Enrichment
BP	GO:0071985	multivesicular body sorting pathway	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	357	457
IPR003959	ATPase_AAA_core	219	331
IPR004176	Clp_R_dom	20	61
IPR004176	Clp_R_dom	102	161
IPR019489	Clp_ATPase_C	801	878
IPR003959	ATPase_AAA_core	626	794

External Links

No external refs found!